Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015888152.1_cds_XP_016442695.1_37932
CDS Infomation

[gene=LOC107768105] [db_xref=GeneID:107768105] [protein=aspartic proteinase-like protein 2] [protein_id=XP_016442695.1] [location=join(17243..17475,19791..19920,22622..22863,23273..23491,24844..25003,25397..25470,26785..26875,27360..27438,28716..28787,29237..29388)] [gbkey=CDS]
Sequence

ATGGGGAAGATAATGGATCAAAGGAGAAATGGGTGTTTGATATTTTCGTTGTTGGTTTTG
GTAGTAGCTGTGAAGGGTGAAAATTTGGTGTTCAATGTGAAGCATAAATATGGTGGGGGT
AATAAAGGGTCGATTTTGAATGATCTTAAAGCGCATGATAGCCGCCGTCACAGCAGAATG
CTCACCTCCGTCGACTTCAAATTGGGTGGCAATGGTTCTCCCACTGATGCCGCGCTCTAT
TACACTAAGTTATCAATTGGAACGCCTTCAAAGGAATATCATGTCCAGGTTGATACTGGA
AGTGACATTTTATGGGTGAACTGTGCTGGCTGTGAGGGATGTCCTACAAAAAGTGATCTC
GGGATAGACTTGACGCCGTATGACTTGAAGGCCTCTACAACTGCAAAATCTGTTTCTTGT
GATGAAGAGTTTTGCATGCTTAATACTCCCTATTCGGATTGCAAGGTGGGAATGCCATGT
GATTATCAGGTTAGTTATGGAGATGGAAGCTCAACCTCAGGATTCTTTGTAAAGGATGAT
ATTCGGTTTGATCAAGTGTCAGGAGACCTTAAAACAACATCTATGAACGGGTCTATAGCA
TTTGGGTGCTCGTCTAGACAAGAACTAAGTAATCCCAGTCAAGCAGTTGATGGAATACTT
GGTTTTGGACAAGCAAGTTCGTCCGTTATTTCGCAGCTAGCTGCAGCGGGAAAGGTGAAG
AAAATATTTGCGCATTGCCTAGACGGAAAGAATGGAGGTGGTATATTTACCATTGGACCA
GTAGTTCAGCCAAAAGTAAATTCAACACCACTAGTCCCCGATTCGCCACATTATAATGTT
GTTATGAAAGGAATTGAGGTTGGTGGTGAAGTTCTAGACATTCCCACAACCATATTCGAC
ACGAGGTCCAGTATGACAATAATTGACAGTGGCACAACCTTAGCATATCTTCCAAGCATG
GTCTACAGTGCTCTCATCTACAAGTTGATGGAACGGCAACCACAGTTAAATATTCGTCTT
GTTGAGGGAAGTTTCCGCTGCTTTGACTACACCGGGAAGATTGATGATGGGTTCCCAGTT
GTAACATTCCGCTTTGCAGATTCGCTTTCTTTGACAGTTTATCCACATGATTATCTTTTC
CAAGTCACAGAGAGTCGATGGTGTTTTGGTTGGCAAGACAGTGGAGGAATGCAGGCAAAG
GATGGAGTGGCAATAACTCTGTTAGGAGATCTTGTGTTATCAAACAAGCTAGTTCTGTAT
GATGTTGAAAACCAGACCATTGGTTGGACTGAGTACGACTGCTCTTCAACCATCCAACTC
AAATATGAAAGCTCTGGAAGCGCGTATACTGTGGCTTCTCACAATGTTTCATCATCTTCT
ACTGTGGATTCAGGGAAGGCTTTTACATTCTTCTTGCTAATCATTTCCATCCTGTATAAT
TTGTTGAAGTGA

Peptide Sequence

PEP ID

XP_016442695.1
PEP Infomation

PREDICTED: aspartic proteinase-like protein 2 [Nicotiana tabacum]
Sequence

MGKIMDQRRNGCLIFSLLVLVVAVKGENLVFNVKHKYGGGNKGSILNDLKAHDSRRHSRM
LTSVDFKLGGNGSPTDAALYYTKLSIGTPSKEYHVQVDTGSDILWVNCAGCEGCPTKSDL
GIDLTPYDLKASTTAKSVSCDEEFCMLNTPYSDCKVGMPCDYQVSYGDGSSTSGFFVKDD
IRFDQVSGDLKTTSMNGSIAFGCSSRQELSNPSQAVDGILGFGQASSSVISQLAAAGKVK
KIFAHCLDGKNGGGIFTIGPVVQPKVNSTPLVPDSPHYNVVMKGIEVGGEVLDIPTTIFD
TRSSMTIIDSGTTLAYLPSMVYSALIYKLMERQPQLNIRLVEGSFRCFDYTGKIDDGFPV
VTFRFADSLSLTVYPHDYLFQVTESRWCFGWQDSGGMQAKDGVAITLLGDLVLSNKLVLY
DVENQTIGWTEYDCSSTIQLKYESSGSAYTVASHNVSSSSTVDSGKAFTFFLLIISILYN
LLK

Transcript Sequence

Gene sequence data has not been registered.